The Evolution of HD2 Proteins in Green Plants.
Identifieur interne : 001628 ( Main/Exploration ); précédent : 001627; suivant : 001629The Evolution of HD2 Proteins in Green Plants.
Auteurs : S. Bourque [France] ; S. Jeandroz [France] ; V. Grandperret [France] ; N. Lehotai [France] ; S. Aimé [France] ; D E Soltis [États-Unis] ; N W Miles [États-Unis] ; M. Melkonian [Allemagne] ; M K Deyholos [Canada] ; J H Leebens-Mack [États-Unis] ; M W Chase [Australie] ; C J Rothfels [États-Unis] ; D W Stevenson [États-Unis] ; S W Graham [Canada] ; X. Wang [République populaire de Chine] ; S. Wu [République populaire de Chine] ; J C Pires [États-Unis] ; P P Edger [États-Unis] ; Z. Yan [République populaire de Chine] ; Y. Xie [République populaire de Chine] ; E J Carpenter [Canada] ; G K S. Wong [Canada] ; D. Wendehenne [France] ; V. Nicolas-Francès [France]Source :
- Trends in plant science [ 1878-4372 ] ; 2016.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Histone deacetylases, Protéines végétales, Viridiplantae.
- métabolisme : Histone deacetylases, Protéines végétales, Viridiplantae.
- Régulation de l'expression des gènes végétaux.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : Histone Deacetylases, Plant Proteins.
- chemical , metabolism : Histone Deacetylases, Plant Proteins.
- genetics : Viridiplantae.
- metabolism : Viridiplantae.
- Gene Expression Regulation, Plant.
Abstract
In eukaryotes, protein deacetylation is carried out by two well-conserved histone deacetylase (HDAC) families: RPD3/HDA1 and SIR2. Intriguingly, model plants such as Arabidopsis express an additional plant-specific HDAC family, termed type-2 HDACs (HD2s). Transcriptomic analyses from more than 1300 green plants generated by the 1000 plants (1KP) consortium showed that HD2s appeared early in green plant evolution, the first members being detected in several streptophyte green alga. The HD2 family has expanded via several rounds of successive duplication; members are expressed in all major green plant clades. Interestingly, angiosperm species express new HD2 genes devoid of a zinc-finger domain, one of the main structural features of HD2s. These variants may have been associated with the origin and/or the biology of the ovule/seed.
DOI: 10.1016/j.tplants.2016.10.001
PubMed: 27789157
Affiliations:
- Allemagne, Australie, Canada, France, République populaire de Chine, États-Unis
- Australie-Occidentale, Bourgogne, Bourgogne-Franche-Comté, Californie, District de Cologne, Floride, Guangdong, Géorgie (États-Unis), Michigan, Missouri (État), Rhénanie-du-Nord-Westphalie, Texas, État de New York
- Cologne, Dijon, East Lansing, Pékin, Shenzhen
- Université d'État du Michigan
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Le document en format XML
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Wu</name><affiliation wicri:level="1"><nlm:affiliation>Chinese Academy of Sciences (CAS) Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, CAS, 1-104 Beichen West Road, Chaoyang District, Beijing 100101, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Chinese Academy of Sciences (CAS) Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, CAS, 1-104 Beichen West Road, Chaoyang District, Beijing 100101</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Pires, J C" sort="Pires, J C" uniqKey="Pires J" first="J C" last="Pires">J C Pires</name><affiliation wicri:level="2"><nlm:affiliation>Division of Biological Sciences and Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Biological Sciences and Bond Life Sciences Center, University of Missouri, Columbia, MO 65211</wicri:regionArea><placeName><region type="state">Missouri (État)</region></placeName></affiliation></author><author><name sortKey="Edger, P P" sort="Edger, P P" uniqKey="Edger P" first="P P" last="Edger">P P Edger</name><affiliation wicri:level="4"><nlm:affiliation>Department of Horticulture, Michigan State University, East Lansing, MI 48823, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Horticulture, Michigan State University, East Lansing, MI 48823</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation></author><author><name sortKey="Yan, Z" sort="Yan, Z" uniqKey="Yan Z" first="Z" last="Yan">Z. Yan</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Xie, Y" sort="Xie, Y" uniqKey="Xie Y" first="Y" last="Xie">Y. Xie</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Carpenter, E J" sort="Carpenter, E J" uniqKey="Carpenter E" first="E J" last="Carpenter">E J Carpenter</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9</wicri:regionArea><wicri:noRegion>AB T6G 2E9</wicri:noRegion></affiliation></author><author><name sortKey="Wong, G K S" sort="Wong, G K S" uniqKey="Wong G" first="G K S" last="Wong">G K S. Wong</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China; Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada; Department of Medicine, University of Alberta, Edmonton, AB T6G 2E1, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China; Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada; Department of Medicine, University of Alberta, Edmonton, AB T6G 2E1</wicri:regionArea><wicri:noRegion>AB T6G 2E1</wicri:noRegion></affiliation></author><author><name sortKey="Wendehenne, D" sort="Wendehenne, D" uniqKey="Wendehenne D" first="D" last="Wendehenne">D. Wendehenne</name><affiliation wicri:level="1"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><wicri:noRegion>21000 Dijon</wicri:noRegion><wicri:noRegion>21000 Dijon</wicri:noRegion></affiliation></author><author><name sortKey="Nicolas Frances, V" sort="Nicolas Frances, V" uniqKey="Nicolas Frances V" first="V" last="Nicolas-Francès">V. Nicolas-Francès</name><affiliation wicri:level="1"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><wicri:noRegion>21000 Dijon</wicri:noRegion><wicri:noRegion>21000 Dijon</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2016">2016</date><idno type="RBID">pubmed:27789157</idno><idno type="pmid">27789157</idno><idno type="doi">10.1016/j.tplants.2016.10.001</idno><idno type="wicri:Area/PubMed/Corpus">001440</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001440</idno><idno type="wicri:Area/PubMed/Curation">001418</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001418</idno><idno type="wicri:Area/PubMed/Checkpoint">001418</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001418</idno><idno type="wicri:Area/Ncbi/Merge">003D75</idno><idno type="wicri:Area/Ncbi/Curation">003D75</idno><idno type="wicri:Area/Ncbi/Checkpoint">003D75</idno><idno type="wicri:Area/Main/Merge">001623</idno><idno type="wicri:Area/Main/Curation">001628</idno><idno type="wicri:Area/Main/Exploration">001628</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">The Evolution of HD2 Proteins in Green Plants.</title><author><name sortKey="Bourque, S" sort="Bourque, S" uniqKey="Bourque S" first="S" last="Bourque">S. Bourque</name><affiliation wicri:level="3"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France. Electronic address: stephane.bourque@inra.fr.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><placeName><region type="region" nuts="2">Bourgogne-Franche-Comté</region><region type="old region" nuts="2">Bourgogne</region><settlement type="city">Dijon</settlement></placeName></affiliation></author><author><name sortKey="Jeandroz, S" sort="Jeandroz, S" uniqKey="Jeandroz S" first="S" last="Jeandroz">S. Jeandroz</name><affiliation wicri:level="3"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><placeName><region type="region" nuts="2">Bourgogne-Franche-Comté</region><region type="old region" nuts="2">Bourgogne</region><settlement type="city">Dijon</settlement></placeName></affiliation></author><author><name sortKey="Grandperret, V" sort="Grandperret, V" uniqKey="Grandperret V" first="V" last="Grandperret">V. Grandperret</name><affiliation wicri:level="3"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><placeName><region type="region" nuts="2">Bourgogne-Franche-Comté</region><region type="old region" nuts="2">Bourgogne</region><settlement type="city">Dijon</settlement></placeName></affiliation></author><author><name sortKey="Lehotai, N" sort="Lehotai, N" uniqKey="Lehotai N" first="N" last="Lehotai">N. Lehotai</name><affiliation wicri:level="3"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><placeName><region type="region" nuts="2">Bourgogne-Franche-Comté</region><region type="old region" nuts="2">Bourgogne</region><settlement type="city">Dijon</settlement></placeName></affiliation></author><author><name sortKey="Aime, S" sort="Aime, S" uniqKey="Aime S" first="S" last="Aimé">S. Aimé</name><affiliation wicri:level="3"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><placeName><region type="region" nuts="2">Bourgogne-Franche-Comté</region><region type="old region" nuts="2">Bourgogne</region><settlement type="city">Dijon</settlement></placeName></affiliation></author><author><name sortKey="Soltis, D E" sort="Soltis, D E" uniqKey="Soltis D" first="D E" last="Soltis">D E Soltis</name><affiliation wicri:level="2"><nlm:affiliation>Department of Biology, Florida Museum of Natural History, Gainesville, FL 32611, USA; Genetics Institute, University of Florida, Gainesville, FL 32611, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Florida Museum of Natural History, Gainesville, FL 32611, USA; Genetics Institute, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Miles, N W" sort="Miles, N W" uniqKey="Miles N" first="N W" last="Miles">N W Miles</name><affiliation wicri:level="2"><nlm:affiliation>Department of Biological Sciences, University of North Texas, 1155 Union Circle, Denton, TX 76201, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biological Sciences, University of North Texas, 1155 Union Circle, Denton, TX 76201</wicri:regionArea><placeName><region type="state">Texas</region></placeName></affiliation></author><author><name sortKey="Melkonian, M" sort="Melkonian, M" uniqKey="Melkonian M" first="M" last="Melkonian">M. Melkonian</name><affiliation wicri:level="3"><nlm:affiliation>Botanical Institute, Cologne Biocenter, University of Cologne, 50674 Cologne, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Botanical Institute, Cologne Biocenter, University of Cologne, 50674 Cologne</wicri:regionArea><placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region><region type="district" nuts="2">District de Cologne</region><settlement type="city">Cologne</settlement></placeName></affiliation></author><author><name sortKey="Deyholos, M K" sort="Deyholos, M K" uniqKey="Deyholos M" first="M K" last="Deyholos">M K Deyholos</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biology, University of British Columbia, Kelowna, BC V1V 1V7, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biology, University of British Columbia, Kelowna, BC V1V 1V7</wicri:regionArea><wicri:noRegion>BC V1V 1V7</wicri:noRegion></affiliation></author><author><name sortKey="Leebens Mack, J H" sort="Leebens Mack, J H" uniqKey="Leebens Mack J" first="J H" last="Leebens-Mack">J H Leebens-Mack</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Biology, University of Georgia, Athens, GA 30602, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Biology, University of Georgia, Athens, GA 30602</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Chase, M W" sort="Chase, M W" uniqKey="Chase M" first="M W" last="Chase">M W Chase</name><affiliation wicri:level="2"><nlm:affiliation>Jodrell Laboratory, Royal Botanic Gardens Kew, Richmond, Surrey, UK; Plant Biology, University of Western Australia, 35 Stirling Highway, Crawley, Perth, 6009, Western Australia.</nlm:affiliation><country>Australie</country><placeName><region type="state">Australie-Occidentale</region></placeName><wicri:cityArea>Jodrell Laboratory, Royal Botanic Gardens Kew, Richmond, Surrey, UK; Plant Biology, University of Western Australia, 35 Stirling Highway, Crawley, Perth, 6009</wicri:cityArea></affiliation></author><author><name sortKey="Rothfels, C J" sort="Rothfels, C J" uniqKey="Rothfels C" first="C J" last="Rothfels">C J Rothfels</name><affiliation wicri:level="2"><nlm:affiliation>University Herbarium and Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>University Herbarium and Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Stevenson, D W" sort="Stevenson, D W" uniqKey="Stevenson D" first="D W" last="Stevenson">D W Stevenson</name><affiliation wicri:level="2"><nlm:affiliation>New York Botanical Garden, 2900 Southern Boulevard, Bronx, NY 10458, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>New York Botanical Garden, 2900 Southern Boulevard, Bronx, NY 10458</wicri:regionArea><placeName><region type="state">État de New York</region></placeName></affiliation></author><author><name sortKey="Graham, S W" sort="Graham, S W" uniqKey="Graham S" first="S W" last="Graham">S W Graham</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Botany, University of British Columbia, Vancouver, BC V6T 1Z4</wicri:regionArea><wicri:noRegion>BC V6T 1Z4</wicri:noRegion></affiliation></author><author><name sortKey="Wang, X" sort="Wang, X" uniqKey="Wang X" first="X" last="Wang">X. Wang</name><affiliation wicri:level="1"><nlm:affiliation>Chinese Academy of Sciences (CAS) Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, CAS, 1-104 Beichen West Road, Chaoyang District, Beijing 100101, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Chinese Academy of Sciences (CAS) Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, CAS, 1-104 Beichen West Road, Chaoyang District, Beijing 100101</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Wu, S" sort="Wu, S" uniqKey="Wu S" first="S" last="Wu">S. Wu</name><affiliation wicri:level="1"><nlm:affiliation>Chinese Academy of Sciences (CAS) Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, CAS, 1-104 Beichen West Road, Chaoyang District, Beijing 100101, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Chinese Academy of Sciences (CAS) Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, CAS, 1-104 Beichen West Road, Chaoyang District, Beijing 100101</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Pires, J C" sort="Pires, J C" uniqKey="Pires J" first="J C" last="Pires">J C Pires</name><affiliation wicri:level="2"><nlm:affiliation>Division of Biological Sciences and Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Division of Biological Sciences and Bond Life Sciences Center, University of Missouri, Columbia, MO 65211</wicri:regionArea><placeName><region type="state">Missouri (État)</region></placeName></affiliation></author><author><name sortKey="Edger, P P" sort="Edger, P P" uniqKey="Edger P" first="P P" last="Edger">P P Edger</name><affiliation wicri:level="4"><nlm:affiliation>Department of Horticulture, Michigan State University, East Lansing, MI 48823, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Horticulture, Michigan State University, East Lansing, MI 48823</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation></author><author><name sortKey="Yan, Z" sort="Yan, Z" uniqKey="Yan Z" first="Z" last="Yan">Z. Yan</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Xie, Y" sort="Xie, Y" uniqKey="Xie Y" first="Y" last="Xie">Y. Xie</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Carpenter, E J" sort="Carpenter, E J" uniqKey="Carpenter E" first="E J" last="Carpenter">E J Carpenter</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9</wicri:regionArea><wicri:noRegion>AB T6G 2E9</wicri:noRegion></affiliation></author><author><name sortKey="Wong, G K S" sort="Wong, G K S" uniqKey="Wong G" first="G K S" last="Wong">G K S. Wong</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China; Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada; Department of Medicine, University of Alberta, Edmonton, AB T6G 2E1, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Beijing Genomics Institute (BGI)-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China; Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada; Department of Medicine, University of Alberta, Edmonton, AB T6G 2E1</wicri:regionArea><wicri:noRegion>AB T6G 2E1</wicri:noRegion></affiliation></author><author><name sortKey="Wendehenne, D" sort="Wendehenne, D" uniqKey="Wendehenne D" first="D" last="Wendehenne">D. Wendehenne</name><affiliation wicri:level="1"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><wicri:noRegion>21000 Dijon</wicri:noRegion><wicri:noRegion>21000 Dijon</wicri:noRegion></affiliation></author><author><name sortKey="Nicolas Frances, V" sort="Nicolas Frances, V" uniqKey="Nicolas Frances V" first="V" last="Nicolas-Francès">V. Nicolas-Francès</name><affiliation wicri:level="1"><nlm:affiliation>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Agroécologie, AgroSup Dijon, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Université Bourgogne Franche-Comté, 21000 Dijon</wicri:regionArea><wicri:noRegion>21000 Dijon</wicri:noRegion><wicri:noRegion>21000 Dijon</wicri:noRegion></affiliation></author></analytic><series><title level="j">Trends in plant science</title><idno type="eISSN">1878-4372</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Gene Expression Regulation, Plant</term><term>Histone Deacetylases (genetics)</term><term>Histone Deacetylases (metabolism)</term><term>Plant Proteins (genetics)</term><term>Plant Proteins (metabolism)</term><term>Viridiplantae (genetics)</term><term>Viridiplantae (metabolism)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Histone deacetylases (génétique)</term><term>Histone deacetylases (métabolisme)</term><term>Protéines végétales (génétique)</term><term>Protéines végétales (métabolisme)</term><term>Régulation de l'expression des gènes végétaux</term><term>Viridiplantae (génétique)</term><term>Viridiplantae (métabolisme)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Histone Deacetylases</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Histone Deacetylases</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Viridiplantae</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Histone deacetylases</term><term>Protéines végétales</term><term>Viridiplantae</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Viridiplantae</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Histone deacetylases</term><term>Protéines végétales</term><term>Viridiplantae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Expression Regulation, Plant</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Régulation de l'expression des gènes végétaux</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In eukaryotes, protein deacetylation is carried out by two well-conserved histone deacetylase (HDAC) families: RPD3/HDA1 and SIR2. Intriguingly, model plants such as Arabidopsis express an additional plant-specific HDAC family, termed type-2 HDACs (HD2s). Transcriptomic analyses from more than 1300 green plants generated by the 1000 plants (1KP) consortium showed that HD2s appeared early in green plant evolution, the first members being detected in several streptophyte green alga. The HD2 family has expanded via several rounds of successive duplication; members are expressed in all major green plant clades. Interestingly, angiosperm species express new HD2 genes devoid of a zinc-finger domain, one of the main structural features of HD2s. These variants may have been associated with the origin and/or the biology of the ovule/seed.</div></front></TEI><affiliations><list><country><li>Allemagne</li><li>Australie</li><li>Canada</li><li>France</li><li>République populaire de Chine</li><li>États-Unis</li></country><region><li>Australie-Occidentale</li><li>Bourgogne</li><li>Bourgogne-Franche-Comté</li><li>Californie</li><li>District de Cologne</li><li>Floride</li><li>Guangdong</li><li>Géorgie (États-Unis)</li><li>Michigan</li><li>Missouri (État)</li><li>Rhénanie-du-Nord-Westphalie</li><li>Texas</li><li>État de New York</li></region><settlement><li>Cologne</li><li>Dijon</li><li>East Lansing</li><li>Pékin</li><li>Shenzhen</li></settlement><orgName><li>Université d'État du Michigan</li></orgName></list><tree><country name="France"><region name="Bourgogne-Franche-Comté"><name sortKey="Bourque, S" sort="Bourque, S" uniqKey="Bourque S" first="S" last="Bourque">S. Bourque</name></region><name sortKey="Aime, S" sort="Aime, S" uniqKey="Aime S" first="S" last="Aimé">S. Aimé</name><name sortKey="Grandperret, V" sort="Grandperret, V" uniqKey="Grandperret V" first="V" last="Grandperret">V. Grandperret</name><name sortKey="Jeandroz, S" sort="Jeandroz, S" uniqKey="Jeandroz S" first="S" last="Jeandroz">S. Jeandroz</name><name sortKey="Lehotai, N" sort="Lehotai, N" uniqKey="Lehotai N" first="N" last="Lehotai">N. Lehotai</name><name sortKey="Nicolas Frances, V" sort="Nicolas Frances, V" uniqKey="Nicolas Frances V" first="V" last="Nicolas-Francès">V. Nicolas-Francès</name><name sortKey="Wendehenne, D" sort="Wendehenne, D" uniqKey="Wendehenne D" first="D" last="Wendehenne">D. Wendehenne</name></country><country name="États-Unis"><region name="Floride"><name sortKey="Soltis, D E" sort="Soltis, D E" uniqKey="Soltis D" first="D E" last="Soltis">D E Soltis</name></region><name sortKey="Edger, P P" sort="Edger, P P" uniqKey="Edger P" first="P P" last="Edger">P P Edger</name><name sortKey="Leebens Mack, J H" sort="Leebens Mack, J H" uniqKey="Leebens Mack J" first="J H" last="Leebens-Mack">J H Leebens-Mack</name><name sortKey="Miles, N W" sort="Miles, N W" uniqKey="Miles N" first="N W" last="Miles">N W Miles</name><name sortKey="Pires, J C" sort="Pires, J C" uniqKey="Pires J" first="J C" last="Pires">J C Pires</name><name sortKey="Rothfels, C J" sort="Rothfels, C J" uniqKey="Rothfels C" first="C J" last="Rothfels">C J Rothfels</name><name sortKey="Stevenson, D W" sort="Stevenson, D W" uniqKey="Stevenson D" first="D W" last="Stevenson">D W Stevenson</name></country><country name="Allemagne"><region name="Rhénanie-du-Nord-Westphalie"><name sortKey="Melkonian, M" sort="Melkonian, M" uniqKey="Melkonian M" first="M" last="Melkonian">M. Melkonian</name></region></country><country name="Canada"><noRegion><name sortKey="Deyholos, M K" sort="Deyholos, M K" uniqKey="Deyholos M" first="M K" last="Deyholos">M K Deyholos</name></noRegion><name sortKey="Carpenter, E J" sort="Carpenter, E J" uniqKey="Carpenter E" first="E J" last="Carpenter">E J Carpenter</name><name sortKey="Graham, S W" sort="Graham, S W" uniqKey="Graham S" first="S W" last="Graham">S W Graham</name><name sortKey="Wong, G K S" sort="Wong, G K S" uniqKey="Wong G" first="G K S" last="Wong">G K S. Wong</name></country><country name="Australie"><region name="Australie-Occidentale"><name sortKey="Chase, M W" sort="Chase, M W" uniqKey="Chase M" first="M W" last="Chase">M W Chase</name></region></country><country name="République populaire de Chine"><noRegion><name sortKey="Wang, X" sort="Wang, X" uniqKey="Wang X" first="X" last="Wang">X. Wang</name></noRegion><name sortKey="Wu, S" sort="Wu, S" uniqKey="Wu S" first="S" last="Wu">S. Wu</name><name sortKey="Xie, Y" sort="Xie, Y" uniqKey="Xie Y" first="Y" last="Xie">Y. Xie</name><name sortKey="Yan, Z" sort="Yan, Z" uniqKey="Yan Z" first="Z" last="Yan">Z. Yan</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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